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| Distribution | Bio-MAGETAB [Download] |
| Author | TFRAYNER [ Tim Rayner ] |
| Version | 1.20 |
| Abstract | A data model and utility API for the MAGE-TAB format. |
| Released | 19 Apr 2011 |
| Size | 246.9 KB |
| MD5 Checksum | dd2fa71a55ee17d48704ad8977d655d5 |
| Additional Files | README | META | Changes | Makefile.PL | |
| Links | search.cpan.org | CPAN::Forum | AnnoCPAN | rt.cpan.org | Rating | CPANTS | CPAN testers | Dependencies | Testers matrix | Prerequisites | Date::Manip | DateTime | DateTime::Format::DateManip | Email::Valid | Moose | MooseX::FollowPBP | MooseX::Types | Params::Coerce | Parse::RecDescent | Text::CSV_XS | URI | |
| Bio::MAGETAB [source] [v 1.2] | Reading and writing MAGE-TAB documents |
| Bio::MAGETAB::ArrayDesign [source] | MAGE-TAB array design class |
| Bio::MAGETAB::Assay [source] | MAGE-TAB assay class |
| Bio::MAGETAB::BaseClass [source] | Abstract base class for all MAGE-TAB classes. |
| Bio::MAGETAB::Comment [source] | MAGE-TAB user-defined comment class |
| Bio::MAGETAB::CompositeElement [source] | MAGE-TAB composite element class |
| Bio::MAGETAB::Contact [source] | MAGE-TAB contact class |
| Bio::MAGETAB::ControlledTerm [source] | MAGE-TAB controlled term class |
| Bio::MAGETAB::Data [source] | Abstract data class |
| Bio::MAGETAB::DataAcquisition [source] | MAGE-TAB data acquisition class |
| Bio::MAGETAB::DatabaseEntry [source] | MAGE-TAB database entry class |
| Bio::MAGETAB::DataFile [source] | MAGE-TAB data file class |
| Bio::MAGETAB::DataMatrix [source] | MAGE-TAB data matrix class |
| Bio::MAGETAB::DesignElement [source] | Abstract design element class |
| Bio::MAGETAB::Edge [source] | MAGE-TAB edge class |
| Bio::MAGETAB::Event [source] | Abstract event class |
| Bio::MAGETAB::Extract [source] | MAGE-TAB extract class |
| Bio::MAGETAB::Factor [source] | MAGE-TAB experimental factor class |
| Bio::MAGETAB::FactorValue [source] | MAGE-TAB experimental factor class |
| Bio::MAGETAB::Feature [source] | MAGE-TAB feature class |
| Bio::MAGETAB::Investigation [source] | MAGE-TAB investigation class |
| Bio::MAGETAB::LabeledExtract [source] | MAGE-TAB labeled extract class |
| Bio::MAGETAB::Material [source] | Abstract material class |
| Bio::MAGETAB::MatrixColumn [source] | MAGE-TAB matrix column class |
| Bio::MAGETAB::MatrixRow [source] | MAGE-TAB matrix row class |
| Bio::MAGETAB::Measurement [source] | MAGE-TAB measurement class |
| Bio::MAGETAB::Node [source] | Abstract node class |
| Bio::MAGETAB::Normalization [source] | MAGE-TAB data acquisition class |
| Bio::MAGETAB::ParameterValue [source] | MAGE-TAB parameter value class |
| Bio::MAGETAB::Protocol [source] | MAGE-TAB protocol class |
| Bio::MAGETAB::ProtocolApplication [source] | MAGE-TAB protocol application class |
| Bio::MAGETAB::ProtocolParameter [source] | MAGE-TAB protocol parameter class |
| Bio::MAGETAB::Publication [source] | MAGE-TAB publication class |
| Bio::MAGETAB::Reporter [source] | MAGE-TAB reporter class |
| Bio::MAGETAB::Sample [source] | MAGE-TAB sample class |
| Bio::MAGETAB::SDRF [source] | MAGE-TAB SDRF class |
| Bio::MAGETAB::SDRFRow [source] | MAGE-TAB SDRF row class |
| Bio::MAGETAB::Source [source] | MAGE-TAB source class |
| Bio::MAGETAB::TermSource [source] | MAGE-TAB term source class |
| Bio::MAGETAB::Types [source] | custom data types for Bio::MAGETAB |
| Bio::MAGETAB::Util::Builder [source] | A storage class used to track |
| Bio::MAGETAB::Util::DBLoader [source] | A persistent storage class used to |
| Bio::MAGETAB::Util::Persistence [source] | A Tangram-based object persistence |
| Bio::MAGETAB::Util::Reader [source] [v 1] | A parser/validator for MAGE-TAB documents. |
| Bio::MAGETAB::Util::Reader::ADF [source] | ADF parser class. |
| Bio::MAGETAB::Util::Reader::DataMatrix [source] | Data matrix parser class. |
| Bio::MAGETAB::Util::Reader::IDF [source] | IDF parser class. |
| Bio::MAGETAB::Util::Reader::SDRF [source] | SDRF parser class. |
| Bio::MAGETAB::Util::Reader::Tabfile [source] | An abstract class providing methods for |
| Bio::MAGETAB::Util::Reader::TagValueFile [source] | An abstract class providing methods for |
| Bio::MAGETAB::Util::RewriteAE [source] | A utility class providing methods to |
| Bio::MAGETAB::Util::Writer [source] | Export of MAGE-TAB objects. |
| Bio::MAGETAB::Util::Writer::ADF [source] | Export of MAGE-TAB ArrayDesign |
| Bio::MAGETAB::Util::Writer::GraphViz [source] | Visualization of MAGE-TAB objects. |
| Bio::MAGETAB::Util::Writer::IDF [source] | Export of MAGE-TAB Investigation |
| Bio::MAGETAB::Util::Writer::SDRF [source] | Export of MAGE-TAB SDRF |
| Bio::MAGETAB::Util::Writer::Tabfile [source] | Abstract MAGE-TAB exporter class. |
| Development Stage (Note: *NO IMPLIED TIMESCALES*) | Beta testing |
| Support Level | Developer |
| Language Used | Perl-only, no compiler needed, should be platform independent |
| Interface Style | Object oriented using blessed references and/or inheritance |
| Public License | GPL: GNU General Public License |
| No results found [ppm-request] |
| Problems, suggestions, or comments to Randy Kobes. | Questions? Check the FAQ. | |
| Enable installations using PAR::WebStart. |