Browse and search CPAN : Bio-NEXUS

Distribution	Bio-NEXUS [Download]
Author	ARLIN [ Arlin Stoltzfus ]
Version	0.76
Abstract	Bio::NEXUS - A NEXUS Application Programming Interface in Perl
Released	22 Sep 2010
Size	1009.2 KB
MD5 Checksum	07c3b969a64763af238dc4346a76a7ad
Additional Files	README \| META \| INSTALL \| Makefile.PL \| Build.PL \|
Links	search.cpan.org \| CPAN::Forum \| AnnoCPAN \| rt.cpan.org \| Rating \| CPANTS \| CPAN testers \| Dependencies \| Testers matrix
Prerequisites	Test::More \|

Modules

Bio::NEXUS [source] [v 0.76]	An object-oriented Perl Applications Programming Interface (API) for the NEXUS file format
Bio::NEXUS::AssumptionsBlock [source]	Represents ASSUMPTIONS block of a NEXUS file
Bio::NEXUS::Block [source]	Provides useful functions for blocks in NEXUS file (parent class).
Bio::NEXUS::CharactersBlock [source]	Represents a CHARACTERS Block (Data or Characters) of a NEXUS file
Bio::NEXUS::CodonsBlock [source]	Represents CODONS block in NEXUS file
Bio::NEXUS::DataBlock [source]	Represents the deprecated DATA Block in NEXUS file.
Bio::NEXUS::DistancesBlock [source]	Represents DISTANCES block in NEXUS file
Bio::NEXUS::Functions [source]	Provides private utiliy functions for the module
Bio::NEXUS::HistoryBlock [source]	Represents a HISTORY block of a NEXUS file
Bio::NEXUS::Matrix [source]	Provides functions for handling blocks that have matrices
Bio::NEXUS::NHXCmd [source]	Provides functions for manipulating nodes in trees
Bio::NEXUS::Node [source]	Provides functions for manipulating nodes in trees
Bio::NEXUS::NotesBlock [source]	Represents a NOTES block in a NEXUS file.
Bio::NEXUS::SetsBlock [source]	Represents SETS block of a NEXUS file
Bio::NEXUS::SpanBlock [source]	Represent SPAN block in a NEXUS file (contains meta data).
Bio::NEXUS::TaxaBlock [source]	Represents TAXA block of a NEXUS file
Bio::NEXUS::TaxUnit [source]	Represents a taxon unit in a NEXUS file
Bio::NEXUS::TaxUnitSet [source]	Represents a sets of OTUS (Bio::NEXUS::TaxUnits objects) in a NEXUS file
Bio::NEXUS::Tools::GraphicsParams
Bio::NEXUS::Tools::NexModifier
Bio::NEXUS::Tools::NexPlotter
Bio::NEXUS::Tree [source]	Provides functions for manipulating trees
Bio::NEXUS::TreesBlock [source]	Represents TREES block of a NEXUS file
Bio::NEXUS::UnalignedBlock [source]	Represents an UNALIGNED block of a NEXUS file
Bio::NEXUS::UnknownBlock [source]	Represents a simple object for storing information unrecognized blocks by the Bio::NEXUS module.
Bio::NEXUS::Util::Exceptions [source]	Exception classes for Bio::NEXUS.
Bio::NEXUS::Util::Logger [source]	Logging for Bio::NEXUS.
Bio::NEXUS::WeightSet [source]	Represents column weights in alignment ( for each character)

Win32 PPM packages for "Bio-NEXUS"

ActiveState default Perl 5.10 repository [ v 0.76 ]

ActiveState default Perl 5.12 repository [ v 0.76 ]

ActiveState default Perl 5.6 repository [ v 0.67 ]

ActiveState default Perl 5.8 repository [ v 0.67 ]

trouchelle.com Perl 5.10 repository [ v 0.76 ]

trouchelle.com Perl 5.12 repository [ v 0.75 ]

trouchelle.com Perl 5.8 repository [ v 0.67 ]

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Win32 PPM packages for "Bio-NEXUS"