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Distribution Finnigan [Download]
Author SELKOVJR [ Gene Selkov, Jr. ]
Version 0.0204
Abstract Thermo/Finnigan mass spec data decoder
Released 17 Apr 2011
Size 455.3 KB
MD5 Checksum 851b89ac15452acd3143c4199834cf00
Additional Files README   |   META   |   Changes   |   Makefile.PL   |  
Links search.cpan.org   |   CPAN::Forum  |   AnnoCPAN  |   rt.cpan.org  |   Rating  | CPANTS  | CPAN testers | Dependencies | Testers matrix
Prerequisites Data::Hexdumper  |   Devel::Size  |   Encode  |   File::Temp  |   Getopt::Declare  |   Getopt::Long  |   MIME::Base64  |   Module::Find  |   Storable  |   Tie::IxHash  |   XML::Generator  |  

Modules

Finnigan  [source]   [v 0.0204] Thermo/Finnigan mass spec data decoder
Finnigan::AuditTag  [source]   [v 0.0204] a decoder for AuditTag, a substructure found in the Finnigan file headers
Finnigan::CASInfo  [source]   [v 0.0204] a decoder for autosampler data
Finnigan::CASInfoPreamble  [source]   [v 0.0204] a decoder for CASInfoPreamble, a numeric autosampler descriptor
Finnigan::Decoder  [source]   [v 0.0204] a generic binary structure decoder
Finnigan::Error  [source]   [v 0.0204] a decoder for Error, an error log record
Finnigan::FileHeader  [source]   [v 0.0204] a decoder for Finnigan file headers
Finnigan::FractionCollector  [source]   [v 0.0204] a decoder for FractionCollector, a mass range object in ScanEvent
Finnigan::GenericDataDescriptor  [source]   [v 0.0204] a decoder for GenericDataDescriptor, a key to decoding GenericRecord fields
Finnigan::GenericDataHeader  [source]   [v 0.0204] a decoder for GenericDataHeader -- a key to decoding generic data records
Finnigan::GenericRecord  [source]   [v 0.0204] a decoder for data structures defined by GenericDataHeader
Finnigan::InjectionData  [source]   [v 0.0204] a decoder for the injection parameters in a sequence table row
Finnigan::InstID  [source]   [v 0.0204] a decoder for InstID, a set of instrument identifiers
Finnigan::InstrumentLogRecord  [source]   [v 0.0204] a decoder for a single Instrument Log record
Finnigan::MethodFile  [source]   [v 0.0204] a decoder for the outer MethodFile container
Finnigan::OLE2DIF  [source]   [v 0.0204] a decoder for Double-Indirect FAT, a block allocation structure in Microsoft OLE2
Finnigan::OLE2DirectoryEntry  [source]   [v 0.0204] a decoder for the Microsoft OLE2 directory entry
Finnigan::OLE2FAT  [source]   [v 0.0204] a decoder for FAT Sector, a block allocation structure in OLE2
Finnigan::OLE2File  [source]   [v 0.0204] a decoder for Microsoft structured data files (OLE2 a.k.a. CDF)
Finnigan::OLE2Header  [source]   [v 0.0204] a decoder for the Microsoft OLE2 header structure
Finnigan::OLE2Property  [source]   [v 0.0204] a decoder for the Property structure in Microsoft OLE2
Finnigan::PacketHeader  [source]   [v 0.0204] a decoder for PacketHeader, a substructure of ScanDataPaket
Finnigan::Peak  [source]   [v 0.0204] a full-featured decoder for a single (M/z, abundance) pair, an element of the PeakList structure
Finnigan::Peaks  [source]   [v 0.0204] a decoder for PeaksList, the list of peak centroids
Finnigan::Profile  [source]   [v 0.0204] a full-featured decoder for Finnigan scan profiles
Finnigan::ProfileChunk  [source]   [v 0.0204] a full-featured decoder for a single ProfileChunk structure
Finnigan::RawFileInfo  [source]   [v 0.0204] a decoder for RawFileInfo, the primary index structure
Finnigan::RawFileInfoPreamble  [source]   [v 0.0204] a decoder for RawFileInfoPreamble, the binary data part of RawFileInfo
Finnigan::Reaction  [source]   [v 0.0204] a decoder for Reaction, the container for precursor mass and fragmentation energy
Finnigan::RunHeader  [source]   [v 0.0204] a decoder for RunHeader, the primary file index structure
Finnigan::SampleInfo  [source]   [v 0.0204] a decoder for SampleInfo, the primary file index structure
Finnigan::Scan  [source]   [v 0.0204] a lightweight scan data decoder
Finnigan::ScanEvent  [source]   [v 0.0204] a decoder for ScanEvent, a detailed scan descriptor
Finnigan::ScanEventPreamble  [source]   [v 0.0204] a decoder for ScanEventPreamble, the byte array component of ScanEvent
Finnigan::ScanEventTemplate  [source]   [v 0.0204] a decoder for ScanEventTemplate, the prototype scan descriptor
Finnigan::ScanIndexEntry  [source]   [v 0.0204] a decoder for ScanIndexEntry, a linked list element pointing to scan data
Finnigan::ScanParameters  [source]   [v 0.0204] a decoder for ScanParameters, a GenericRecord containing various scan meta-data.
Finnigan::SeqRow  [source]   [v 0.0204] a decoder for one row of the sequencer table

Categories

Data Type Utilities    >>     Finnigan
Commercial Software Interfaces    >>     Finnigan

dslip information

Development Stage (Note: *NO IMPLIED TIMESCALES*) Released
Support Level Developer
Language Used Perl-only, no compiler needed, should be platform independent
Interface Style Object oriented using blessed references and/or inheritance
Public License GPL: GNU General Public License

Win32 PPM packages for "Finnigan"

ActiveState default Perl 5.10 repository   [  v 0.0204   ]
trouchelle.com Perl 5.10 repository   [  v 0.0204   ]

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