Algorithm-NeedlemanWunsch

This module implements the Needleman-Wunsch sequence alignment algorithm - similar to finding the longest common subsequence (as used e.g. in Algorithm::Diff), but with finer-grained control over which mismatches are most serious and which matches most desirable.

The algorithm is described at
http://en.wikipedia.org/wiki/Needleman-Wunsch

INSTALLATION

To install this module, run the following commands:

perl Makefile.PL
make
make test
make install

SUPPORT AND DOCUMENTATION

After installing, you can find documentation for this module with the perldoc command.

perldoc Algorithm::NeedlemanWunsch

You can also look for information at:

Search CPAN

http://search.cpan.org/dist/Algorithm-NeedlemanWunsch

CPAN Request Tracker:

http://rt.cpan.org/NoAuth/Bugs.html?Dist=Algorithm-NeedlemanWunsch

CPAN Ratings:

http://cpanratings.perl.org/d/Algorithm-NeedlemanWunsch

COPYRIGHT AND LICENCE

Copyright (C) 2007 Vaclav Barta

This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.