Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop - Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop documentation


Bio-Chado-Schema documentation Contained in the Bio-Chado-Schema distribution.

Index


Code Index:

NAME

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Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop

DESCRIPTION

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Extensible properties for expression to cvterm associations. Examples: qualifiers.

NAME

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Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop

ACCESSORS

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expression_cvtermprop_id

  data_type: 'integer'
  is_auto_increment: 1
  is_nullable: 0
  sequence: 'expression_cvtermprop_expression_cvtermprop_id_seq'

expression_cvterm_id

  data_type: 'integer'
  is_foreign_key: 1
  is_nullable: 0

type_id

  data_type: 'integer'
  is_foreign_key: 1
  is_nullable: 0

The name of the property/slot is a cvterm. The meaning of the property is defined in that cvterm. For example, cvterms may come from the FlyBase miscellaneous cv.

value

  data_type: 'text'
  is_nullable: 1

The value of the property, represented as text. Numeric values are converted to their text representation. This is less efficient than using native database types, but is easier to query.

rank

  data_type: 'integer'
  default_value: 0
  is_nullable: 0

Property-Value ordering. Any expression_cvterm can have multiple values for any particular property type - these are ordered in a list using rank, counting from zero. For properties that are single-valued rather than multi-valued, the default 0 value should be used.

RELATIONS

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expression_cvterm

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Expression::ExpressionCvterm

type

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Cv::Cvterm

AUTHOR

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Robert Buels <rbuels@cpan.org>

COPYRIGHT AND LICENSE

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Bio-Chado-Schema documentation Contained in the Bio-Chado-Schema distribution.

package Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop;
BEGIN {
  $Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
  $Bio::Chado::Schema::Result::Expression::ExpressionCvtermprop::VERSION = '0.08100';
}

# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE

use strict;
use warnings;

use base 'DBIx::Class::Core';



__PACKAGE__->table("expression_cvtermprop");


__PACKAGE__->add_columns(
  "expression_cvtermprop_id",
  {
    data_type         => "integer",
    is_auto_increment => 1,
    is_nullable       => 0,
    sequence          => "expression_cvtermprop_expression_cvtermprop_id_seq",
  },
  "expression_cvterm_id",
  { data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
  "type_id",
  { data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
  "value",
  { data_type => "text", is_nullable => 1 },
  "rank",
  { data_type => "integer", default_value => 0, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("expression_cvtermprop_id");
__PACKAGE__->add_unique_constraint(
  "expression_cvtermprop_c1",
  ["expression_cvterm_id", "type_id", "rank"],
);


__PACKAGE__->belongs_to(
  "expression_cvterm",
  "Bio::Chado::Schema::Result::Expression::ExpressionCvterm",
  { expression_cvterm_id => "expression_cvterm_id" },
  {
    cascade_copy   => 0,
    cascade_delete => 0,
    is_deferrable  => 1,
    on_delete      => "CASCADE",
    on_update      => "CASCADE",
  },
);


__PACKAGE__->belongs_to(
  "type",
  "Bio::Chado::Schema::Result::Cv::Cvterm",
  { cvterm_id => "type_id" },
  {
    cascade_copy   => 0,
    cascade_delete => 0,
    is_deferrable  => 1,
    on_delete      => "CASCADE",
    on_update      => "CASCADE",
  },
);


# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:lUGuhQAy+DWrt2blIh35zw


# You can replace this text with custom content, and it will be preserved on regeneration
1;

__END__