Bio::Chado::Schema::Result::Genetic::Genotype - Bio::Chado::Schema::Result::Genetic::Genotype documentation
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Genetic::Genotype
DESCRIPTION
Genetic context. A genotype is defined by a collection of features, mutations, balancers, deficiencies, haplotype blocks, or engineered constructs.
NAME
Bio::Chado::Schema::Result::Genetic::Genotype
ACCESSORS
genotype_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'genotype_genotype_id_seq'
name
data_type: 'text'
is_nullable: 1
Optional alternative name for a genotype,
for display purposes.
uniquename
data_type: 'text'
is_nullable: 0
The unique name for a genotype;
typically derived from the features making up the genotype.
description
data_type: 'varchar'
is_nullable: 1
size: 255
RELATIONS
feature_genotypes
nd_experiment_genotypes
phendescs
phenotype_comparison_genotype1s
phenotype_comparison_genotype2s
phenstatements
stock_genotypes
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Genetic::Genotype;
BEGIN {
$Bio::Chado::Schema::Result::Genetic::Genotype::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Genetic::Genotype::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("genotype");
__PACKAGE__->add_columns(
"genotype_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "genotype_genotype_id_seq",
},
"name",
{ data_type => "text", is_nullable => 1 },
"uniquename",
{ data_type => "text", is_nullable => 0 },
"description",
{ data_type => "varchar", is_nullable => 1, size => 255 },
);
__PACKAGE__->set_primary_key("genotype_id");
__PACKAGE__->add_unique_constraint("genotype_c1", ["uniquename"]);
__PACKAGE__->has_many(
"feature_genotypes",
"Bio::Chado::Schema::Result::Genetic::FeatureGenotype",
{ "foreign.genotype_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"nd_experiment_genotypes",
"Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentGenotype",
{ "foreign.genotype_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phendescs",
"Bio::Chado::Schema::Result::Genetic::Phendesc",
{ "foreign.genotype_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phenotype_comparison_genotype1s",
"Bio::Chado::Schema::Result::Genetic::PhenotypeComparison",
{ "foreign.genotype1_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phenotype_comparison_genotype2s",
"Bio::Chado::Schema::Result::Genetic::PhenotypeComparison",
{ "foreign.genotype2_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phenstatements",
"Bio::Chado::Schema::Result::Genetic::Phenstatement",
{ "foreign.genotype_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"stock_genotypes",
"Bio::Chado::Schema::Result::Stock::StockGenotype",
{ "foreign.genotype_id" => "self.genotype_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:/wNzdpdru6dAlQZA59Jrhw
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__