Bio::Chado::Schema::Result::Genetic::PhenotypeComparison - Bio::Chado::Schema::Result::Genetic::PhenotypeComparison documentation
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Genetic::PhenotypeComparison
DESCRIPTION
Comparison of phenotypes e.g., genotype1/environment1/phenotype1 "non-suppressible" with respect to genotype2/environment2/phenotype2.
NAME
Bio::Chado::Schema::Result::Genetic::PhenotypeComparison
ACCESSORS
phenotype_comparison_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'phenotype_comparison_phenotype_comparison_id_seq'
genotype1_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
environment1_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
genotype2_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
environment2_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
phenotype1_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
phenotype2_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
pub_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
organism_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
RELATIONS
environment2
genotype1
phenotype1
environment1
phenotype2
organism
genotype2
pub
phenotype_comparison_cvterms
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Genetic::PhenotypeComparison;
BEGIN {
$Bio::Chado::Schema::Result::Genetic::PhenotypeComparison::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Genetic::PhenotypeComparison::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("phenotype_comparison");
__PACKAGE__->add_columns(
"phenotype_comparison_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "phenotype_comparison_phenotype_comparison_id_seq",
},
"genotype1_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"environment1_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"genotype2_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"environment2_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"phenotype1_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"phenotype2_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"pub_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"organism_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("phenotype_comparison_id");
__PACKAGE__->add_unique_constraint(
"phenotype_comparison_c1",
[
"genotype1_id",
"environment1_id",
"genotype2_id",
"environment2_id",
"phenotype1_id",
"pub_id",
],
);
__PACKAGE__->belongs_to(
"environment2",
"Bio::Chado::Schema::Result::Genetic::Environment",
{ environment_id => "environment2_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"genotype1",
"Bio::Chado::Schema::Result::Genetic::Genotype",
{ genotype_id => "genotype1_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"phenotype1",
"Bio::Chado::Schema::Result::Phenotype::Phenotype",
{ phenotype_id => "phenotype1_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"environment1",
"Bio::Chado::Schema::Result::Genetic::Environment",
{ environment_id => "environment1_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"phenotype2",
"Bio::Chado::Schema::Result::Phenotype::Phenotype",
{ phenotype_id => "phenotype2_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"organism",
"Bio::Chado::Schema::Result::Organism::Organism",
{ organism_id => "organism_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"genotype2",
"Bio::Chado::Schema::Result::Genetic::Genotype",
{ genotype_id => "genotype2_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"pub",
"Bio::Chado::Schema::Result::Pub::Pub",
{ pub_id => "pub_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->has_many(
"phenotype_comparison_cvterms",
"Bio::Chado::Schema::Result::Genetic::PhenotypeComparisonCvterm",
{
"foreign.phenotype_comparison_id" => "self.phenotype_comparison_id",
},
{ cascade_copy => 0, cascade_delete => 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:euaz4GjE5GnXPi2DVp5DtA
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__