Bio::Chado::Schema::Result::Genetic::Phenstatement - Bio::Chado::Schema::Result::Genetic::Phenstatement documentation
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Genetic::Phenstatement
DESCRIPTION
Phenotypes are things like "larval lethal". Phenstatements are things like "dpp-1 is recessive larval lethal". So essentially phenstatement is a linking table expressing the relationship between genotype, environment, and phenotype.
NAME
Bio::Chado::Schema::Result::Genetic::Phenstatement
ACCESSORS
phenstatement_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'phenstatement_phenstatement_id_seq'
genotype_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
environment_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
phenotype_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
pub_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
RELATIONS
phenotype
environment
type
pub
genotype
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Genetic::Phenstatement;
BEGIN {
$Bio::Chado::Schema::Result::Genetic::Phenstatement::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Genetic::Phenstatement::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("phenstatement");
__PACKAGE__->add_columns(
"phenstatement_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "phenstatement_phenstatement_id_seq",
},
"genotype_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"environment_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"phenotype_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"pub_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("phenstatement_id");
__PACKAGE__->add_unique_constraint(
"phenstatement_c1",
[
"genotype_id",
"phenotype_id",
"environment_id",
"type_id",
"pub_id",
],
);
__PACKAGE__->belongs_to(
"phenotype",
"Bio::Chado::Schema::Result::Phenotype::Phenotype",
{ phenotype_id => "phenotype_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"environment",
"Bio::Chado::Schema::Result::Genetic::Environment",
{ environment_id => "environment_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"pub",
"Bio::Chado::Schema::Result::Pub::Pub",
{ pub_id => "pub_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"genotype",
"Bio::Chado::Schema::Result::Genetic::Genotype",
{ genotype_id => "genotype_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:IU5IGB7RlGdeWYK5m8QKgA
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__