Bio::Chado::Schema::Result::Mage::Assay - Bio::Chado::Schema::Result::Mage::Assay documentation
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Mage::Assay
DESCRIPTION
An assay consists of a physical instance of
an array, combined with the conditions used to create the array
(protocols, technician information). The assay can be thought of as a hybridization.
NAME
Bio::Chado::Schema::Result::Mage::Assay
ACCESSORS
assay_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'assay_assay_id_seq'
arraydesign_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
protocol_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
assaydate
data_type: 'timestamp'
default_value: current_timestamp
is_nullable: 1
original: {default_value => \"now()"}
arrayidentifier
data_type: 'text'
is_nullable: 1
arraybatchidentifier
data_type: 'text'
is_nullable: 1
operator_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
dbxref_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
name
data_type: 'text'
is_nullable: 1
description
data_type: 'text'
is_nullable: 1
RELATIONS
acquisitions
dbxref
operator
protocol
arraydesign
assay_biomaterials
assay_projects
assayprops
controls
study_assays
studyfactorvalues
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Mage::Assay;
BEGIN {
$Bio::Chado::Schema::Result::Mage::Assay::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Mage::Assay::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("assay");
__PACKAGE__->add_columns(
"assay_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "assay_assay_id_seq",
},
"arraydesign_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"protocol_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"assaydate",
{
data_type => "timestamp",
default_value => \"current_timestamp",
is_nullable => 1,
original => { default_value => \"now()" },
},
"arrayidentifier",
{ data_type => "text", is_nullable => 1 },
"arraybatchidentifier",
{ data_type => "text", is_nullable => 1 },
"operator_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"dbxref_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"name",
{ data_type => "text", is_nullable => 1 },
"description",
{ data_type => "text", is_nullable => 1 },
);
__PACKAGE__->set_primary_key("assay_id");
__PACKAGE__->add_unique_constraint("assay_c1", ["name"]);
__PACKAGE__->has_many(
"acquisitions",
"Bio::Chado::Schema::Result::Mage::Acquisition",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->belongs_to(
"dbxref",
"Bio::Chado::Schema::Result::General::Dbxref",
{ dbxref_id => "dbxref_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"operator",
"Bio::Chado::Schema::Result::Contact::Contact",
{ contact_id => "operator_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"protocol",
"Bio::Chado::Schema::Result::Mage::Protocol",
{ protocol_id => "protocol_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"arraydesign",
"Bio::Chado::Schema::Result::Mage::Arraydesign",
{ arraydesign_id => "arraydesign_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->has_many(
"assay_biomaterials",
"Bio::Chado::Schema::Result::Mage::AssayBiomaterial",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"assay_projects",
"Bio::Chado::Schema::Result::Mage::AssayProject",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"assayprops",
"Bio::Chado::Schema::Result::Mage::Assayprop",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"controls",
"Bio::Chado::Schema::Result::Mage::Control",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"study_assays",
"Bio::Chado::Schema::Result::Mage::StudyAssay",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"studyfactorvalues",
"Bio::Chado::Schema::Result::Mage::Studyfactorvalue",
{ "foreign.assay_id" => "self.assay_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:tNB0k+0FwL4Nqs2ui/ahrQ
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__