Bio::Chado::Schema::Result::Map::Featurerange - Bio::Chado::Schema::Result::Map::Featurerange documentation
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Map::Featurerange
DESCRIPTION
In cases where the start and end of a mapped feature is a range, leftendf and rightstartf are populated. leftstartf_id, leftendf_id, rightstartf_id, rightendf_id are the ids of features with respect to which the feature is being mapped. These may be cytological bands.
NAME
Bio::Chado::Schema::Result::Map::Featurerange
ACCESSORS
featurerange_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'featurerange_featurerange_id_seq'
featuremap_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
featuremap_id is the id of the feature being mapped.
feature_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
leftstartf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
leftendf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
rightstartf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
rightendf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
rangestr
data_type: 'varchar'
is_nullable: 1
size: 255
RELATIONS
featuremap
leftendf
rightstartf
rightendf
leftstartf
feature
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Map::Featurerange;
BEGIN {
$Bio::Chado::Schema::Result::Map::Featurerange::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Map::Featurerange::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("featurerange");
__PACKAGE__->add_columns(
"featurerange_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "featurerange_featurerange_id_seq",
},
"featuremap_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"feature_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"leftstartf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"leftendf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"rightstartf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"rightendf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"rangestr",
{ data_type => "varchar", is_nullable => 1, size => 255 },
);
__PACKAGE__->set_primary_key("featurerange_id");
__PACKAGE__->belongs_to(
"featuremap",
"Bio::Chado::Schema::Result::Map::Featuremap",
{ featuremap_id => "featuremap_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"leftendf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "leftendf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"rightstartf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "rightstartf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"rightendf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "rightendf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"leftstartf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "leftstartf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"feature",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "feature_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:7AFKlnRnIayzBusw0IrRvA
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__