Bio::Chado::Schema::Result::Sequence::Synonym - Bio::Chado::Schema::Result::Sequence::Synonym documentation
Index
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NAME
Bio::Chado::Schema::Result::Sequence::Synonym
DESCRIPTION
A synonym for a feature. One feature can have multiple synonyms, and the same synonym can apply to multiple features.
NAME
Bio::Chado::Schema::Result::Sequence::Synonym
ACCESSORS
synonym_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'synonym_synonym_id_seq'
name
data_type: 'varchar'
is_nullable: 0
size: 255
The synonym itself. Should be human-readable machine-searchable ascii text.
type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
Types would be symbol and fullname for now.
synonym_sgml
data_type: 'varchar'
is_nullable: 0
size: 255
The fully specified synonym, with any non-ascii characters encoded in SGML.
RELATIONS
cell_line_synonyms
feature_synonyms
library_synonyms
type
MANY-TO-MANY RELATIONSHIPS
features
Type: many_to_many
Related object: Bio::Chado::Schema::Result::Sequence::Feature
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Sequence::Synonym;
BEGIN {
$Bio::Chado::Schema::Result::Sequence::Synonym::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Sequence::Synonym::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("synonym");
__PACKAGE__->add_columns(
"synonym_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "synonym_synonym_id_seq",
},
"name",
{ data_type => "varchar", is_nullable => 0, size => 255 },
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"synonym_sgml",
{ data_type => "varchar", is_nullable => 0, size => 255 },
);
__PACKAGE__->set_primary_key("synonym_id");
__PACKAGE__->add_unique_constraint("synonym_c1", ["name", "type_id"]);
__PACKAGE__->has_many(
"cell_line_synonyms",
"Bio::Chado::Schema::Result::CellLine::CellLineSynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"feature_synonyms",
"Bio::Chado::Schema::Result::Sequence::FeatureSynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"library_synonyms",
"Bio::Chado::Schema::Result::Library::LibrarySynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:Ajt425W/w/2TgCUWIsvTAw
__PACKAGE__->many_to_many
(
'features',
'feature_synonyms' => 'feature',
);
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__