cvterm - note that the closure will apply to both this relationship
Index
Code Index:
NAME
Bio::Chado::Schema::Result::Cv::Cvtermpath
DESCRIPTION
The reflexive transitive closure of
the cvterm_relationship relation.
NAME
Bio::Chado::Schema::Result::Cv::Cvtermpath
ACCESSORS
cvtermpath_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'cvtermpath_cvtermpath_id_seq'
type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
The relationship type that
this is a closure over. If null, then this is a closure over ALL
relationship types. If non-null, then this references a relationship
cvterm - note that the closure will apply to both this relationship
AND the OBO_REL:is_a (subclass) relationship.
subject_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
object_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
cv_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
Closures will mostly be within
one cv. If the closure of a relationship traverses a cv, then this
refers to the cv of the object_id cvterm.
pathdistance
data_type: 'integer'
is_nullable: 1
The number of steps
required to get from the subject cvterm to the object cvterm, counting
from zero (reflexive relationship).
RELATIONS
type
object
subject
cv
AUTHOR
Robert Buels <rbuels@cpan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
package Bio::Chado::Schema::Result::Cv::Cvtermpath;
BEGIN {
$Bio::Chado::Schema::Result::Cv::Cvtermpath::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::Result::Cv::Cvtermpath::VERSION = '0.08100';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
__PACKAGE__->table("cvtermpath");
__PACKAGE__->add_columns(
"cvtermpath_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "cvtermpath_cvtermpath_id_seq",
},
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"subject_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"object_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"cv_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"pathdistance",
{ data_type => "integer", is_nullable => 1 },
);
__PACKAGE__->set_primary_key("cvtermpath_id");
__PACKAGE__->add_unique_constraint(
"cvtermpath_c1",
["subject_id", "object_id", "type_id", "pathdistance"],
);
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"object",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "object_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"subject",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "subject_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->belongs_to(
"cv",
"Bio::Chado::Schema::Result::Cv::Cv",
{ cv_id => "cv_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:LIl0GlpFa7htKB72YF8f5w
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__