Bio::Das::ProServer::SourceAdaptor::simple_interaction

$LastChangedRevision: 549 $

  Interactions involving 001:
  <host>/das/<source>/interaction?interactor=001

  Interactions between 001 and 002
  <host>/das/<source>/interaction?interactor=001;interactor=002

  Interactions with some form of evidence:
  <host>/das/<source>/interaction?interactor=001;detail=property:evidence

  Interactions of a specific type:
  <host>/das/<source>/interaction?interactor=001;detail=property:type,value:foo

  Serves up interaction DAS responses, using a file-based transport.

  [simple_interaction]
  adaptor               = simple_interaction
  state                 = on
  transport             = file
  filename              = /data/interactions.txt
  interactors.filename  = /data/interactors.txt
  coordinates           = MyCoordSys -> 001

  Tab-separated file formats:

  --interactors.txt--
  id	label	dbSource	dbSourceCvId	dbVersion	dbAccession	dbCoordSys	sequence	property	value	propertyCvId	valueCvId	start	end	startStatus	endStatus	startStatusCvId	endStatusCvId

  --interactions.txt--
  interactor,interactor,..(sorted)	label	dbSource	dbSourceCvId	dbVersion	dbAccession	property	value	propertyCvId	valueCvId

Bio::Das::ProServer::SourceAdaptor

None reported

None reported

  Andy Jenkinson <andy.jenkinson@ebi.ac.uk>

Copyright (c) 2007 EMBL-EBI