Bio-MAGE documentation

• Bio-MAGE - Changes
• Bio-MAGE - META.yml
• Bio-MAGE Makefile.PL
• Association - Association documentation  [view source]
• Bio::MAGE - Container module for classes in the MAGE package: MAGE  [view source]
• Bio::MAGE::Array - Container module for classes in the MAGE package: Array  [view source]
• Bio::MAGE::Array::ArrayGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::ArrayManufacture - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::ArrayManufactureDeviation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::FeatureDefect - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::Fiducial - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::ManufactureLIMS - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::ManufactureLIMSBiomaterial - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::PositionDelta - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Array::ZoneDefect - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign - Container module for classes in the MAGE package: ArrayDesign  [view source]
• Bio::MAGE::ArrayDesign::CompositeGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::DesignElementGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::FeatureGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::PhysicalArrayDesign - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::ReporterGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::Zone - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::ZoneGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::ArrayDesign::ZoneLayout - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity - Container module for classes in the MAGE package: AuditAndSecurity  [view source]
• Bio::MAGE::AuditAndSecurity::Audit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity::Contact - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity::Organization - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity::Person - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity::Security - Class for the MAGE-OM API  [view source]
• Bio::MAGE::AuditAndSecurity::SecurityGroup - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Base - generic base class  [view source]
• Bio::MAGE::BioAssay - Container module for classes in the MAGE package: BioAssay  [view source]
• Bio::MAGE::BioAssay::BioAssayCreation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::BioAssayTreatment - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::Channel - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::DerivedBioAssay - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::FeatureExtraction - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::Hybridization - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::Image - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::ImageAcquisition - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::MeasuredBioAssay - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssay::PhysicalBioAssay - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData - Container module for classes in the MAGE package: BioAssayData  [view source]
• Bio::MAGE::BioAssayData::BioAssayDatum - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioAssayDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioAssayMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioAssayMapping - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioDataCube - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioDataTuples - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::BioDataValues - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::CompositeSequenceDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::DerivedBioAssayData - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::DesignElementDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::DesignElementMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::DesignElementMapping - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::FeatureDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::MeasuredBioAssayData - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::QuantitationTypeDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::QuantitationTypeMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::QuantitationTypeMapping - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::ReporterDimension - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioAssayData::Transformation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioEvent - Container module for classes in the MAGE package: BioEvent  [view source]
• Bio::MAGE::BioEvent::Map - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial - Container module for classes in the MAGE package: BioMaterial  [view source]
• Bio::MAGE::BioMaterial::BioMaterialMeasurement - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::BioSample - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::BioSource - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::Compound - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::CompoundMeasurement - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::LabeledExtract - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioMaterial::Treatment - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioSequence - Container module for classes in the MAGE package: BioSequence  [view source]
• Bio::MAGE::BioSequence::SeqFeature - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioSequence::SeqFeatureLocation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BioSequence::SequencePosition - Class for the MAGE-OM API  [view source]
• Bio::MAGE::BQS - Container module for classes in the MAGE package: BQS  [view source]
• Bio::MAGE::BQS::BibliographicReference - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Describable - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Description - Container module for classes in the MAGE package: Description  [view source]
• Bio::MAGE::Description::Database - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Description::DatabaseEntry - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Description::ExternalReference - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Description::OntologyEntry - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement - Container module for classes in the MAGE package: DesignElement  [view source]
• Bio::MAGE::DesignElement::CompositeCompositeMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::CompositePosition - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::CompositeSequence - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::Feature - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::FeatureInformation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::FeatureLocation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::FeatureReporterMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::MismatchInformation - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::Position - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::Reporter - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::ReporterCompositeMap - Class for the MAGE-OM API  [view source]
• Bio::MAGE::DesignElement::ReporterPosition - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Experiment - Container module for classes in the MAGE package: Experiment  [view source]
• Bio::MAGE::Experiment::ExperimentalFactor - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Experiment::ExperimentDesign - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Experiment::FactorValue - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Extendable - Class for the MAGE-OM API  [view source]
• Bio::MAGE::HigherLevelAnalysis - Container module for classes in the MAGE package: HigherLevelAnalysis  [view source]
• Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster - Class for the MAGE-OM API  [view source]
• Bio::MAGE::HigherLevelAnalysis::Node - Class for the MAGE-OM API  [view source]
• Bio::MAGE::HigherLevelAnalysis::NodeContents - Class for the MAGE-OM API  [view source]
• Bio::MAGE::HigherLevelAnalysis::NodeValue - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Identifiable - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement - Container module for classes in the MAGE package: Measurement  [view source]
• Bio::MAGE::Measurement::ConcentrationUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::DistanceUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::MassUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::QuantityUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::TemperatureUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::TimeUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::Unit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Measurement::VolumeUnit - Class for the MAGE-OM API  [view source]
• Bio::MAGE::NameValueType - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::Hardware - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::HardwareApplication - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::Parameter - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::Parameterizable - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::ParameterizableApplication - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::ParameterValue - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::Protocol - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::ProtocolApplication - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::Software - Class for the MAGE-OM API  [view source]
• Bio::MAGE::Protocol::SoftwareApplication - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType - Container module for classes in the MAGE package: QuantitationType  [view source]
• Bio::MAGE::QuantitationType::ConfidenceIndicator - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::DerivedSignal - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::Error - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::ExpectedValue - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::Failed - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::MeasuredSignal - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::PresentAbsent - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::PValue - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::Ratio - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::SpecializedQuantitationType - Class for the MAGE-OM API  [view source]
• Bio::MAGE::QuantitationType::StandardQuantitationType - Class for the MAGE-OM API  [view source]
• classes  [view source]