Bio::Phylo::Parsers::Newick - Parser used by Bio::Phylo::IO, no serviceable parts inside


Bio-Phylo documentation  | view source Contained in the Bio-Phylo distribution.

Index


NAME

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Bio::Phylo::Parsers::Newick - Parser used by Bio::Phylo::IO, no serviceable parts inside

DESCRIPTION

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This module parses tree descriptions in parenthetical format. It is called by the Bio::Phylo::IO facade, don't call it directly.

SEE ALSO

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Bio::Phylo::IO

The newick parser is called by the Bio::Phylo::IO object. Look there to learn how to parse newick strings.

Bio::Phylo::Manual

Also see the manual: Bio::Phylo::Manual and http://rutgervos.blogspot.com.

CITATION

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If you use Bio::Phylo in published research, please cite it:

Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. http://dx.doi.org/10.1186/1471-2105-12-63

REVISION

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 $Id: Newick.pm 1660 2011-04-02 18:29:40Z rvos $


Bio-Phylo documentation  | view source Contained in the Bio-Phylo distribution.