| Bio-Prospect documentation | Contained in the Bio-Prospect distribution. |
Bio::Prospect::Init -- initialization parameters for Bio::Prospect:: $Id: Init.pm,v 1.11 2003/11/18 21:04:19 rkh Exp $
Bio::Prospect::Init contains initialization parameters for the entire Bio::Prospect:: package.
| Bio-Prospect documentation | Contained in the Bio-Prospect distribution. |
package Bio::Prospect::Init; use warnings; use strict; use vars qw( $VERSION ); $VERSION = sprintf( "%d.%02d", q$Revision: 1.11 $ =~ /(\d+)\.(\d+)/ ); # PROSPECT_PATH - location of prospect installation, used by LocalClient $Bio::Prospect::Init::PROSPECT_PATH = '/apps/compbio/i686-linux-2.4/opt/prospect'; # PDB_PATH - location of pdb files, used by LocalClient $Bio::Prospect::Init::PDB_PATH = '/apps/compbio/share/pdb'; # PROCESSED_PDB_PATH - location of processed pdb files for use with # the output_rasmol_script of the Thread class $Bio::Prospect::Init::PROCESSED_PDB_PATH = '/apps/compbio/share/prospect/pdb'; # MVIEW_APP - path to mview application, used by Align $Bio::Prospect::Init::MVIEW_APP = '/apps/compbio/bin/mview'; # SOAP_SERVER_HOST, SOAP_SERVER_PORT - host and port for SOAP::Transport::HTTP # object that dispatches to a SoapServer object. See bin/startProspectSoapServer.pl # for more information. $Bio::Prospect::Init::SOAP_SERVER_HOST = "host"; $Bio::Prospect::Init::SOAP_SERVER_PORT = '8081'; # PING_FAILURE_EMAILME = email the following list of people if the pingProspectSoapServer # script fails to reach SoapServer @Bio::Prospect::Init::PING_FAILURE_EMAILME = q( you ); # PING_FAILURE_NOTIFY_FILE = semaphore for pingProspectSoapServer script. If ping fails, # email is sent to PING_FAILURE_EMAILME list above and then this file is created so # that additional runs of pingProspectSoapServer will not send mail again $Bio::Prospect::Init::PING_FAILURE_SEMPAHORE = '/tmp/prospect_sempahore'; 1;