Bio::LiveSeq::Repeat_Unit - Repeat_Unit class for LiveSeq


BioPerl documentation Contained in the BioPerl distribution.

Index


Code Index:

NAME

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Bio::LiveSeq::Repeat_Unit - Repeat_Unit class for LiveSeq

SYNOPSIS

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  # documentation needed

DESCRIPTION

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Class for REPEAT_UNIT objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).

AUTHOR - Joseph A.L. Insana

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Email: Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX

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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

  Title   : new
  Usage   : $intron1=Bio::LiveSeq::Repeat_Unit->new(-seq => $objref,
					      -start => $startlabel,
					      -end => $endlabel, -strand => 1);

  Function: generates a new Bio::LiveSeq::Repeat_Unit
  Returns : reference to a new object of class Repeat_Unit
  Errorcode -1
  Args    : two labels and an integer


BioPerl documentation Contained in the BioPerl distribution.
#
# bioperl module for Bio::LiveSeq::Repeat_Unit
#
# Please direct questions and support issues to <bioperl-l@bioperl.org> 
#
# Cared for by Joseph Insana <insana@ebi.ac.uk> <jinsana@gmx.net>
#
# Copyright Joseph Insana
#
# You may distribute this module under the same terms as perl itself
#
# POD documentation - main docs before the code

# Let the code begin...

package Bio::LiveSeq::Repeat_Unit;

use strict;
use base qw(Bio::LiveSeq::Repeat_Region);

1;