Chemistry::ESPT::Aprmcrd - AMBER prmcrd file object.


Chemistry-ESPT documentation  | view source Contained in the Chemistry-ESPT distribution.

Index


NAME

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Chemistry::ESPT::Aprmcrd - AMBER prmcrd file object.

SYNOPSIS

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    use Chemistry::ESPT::Aprmcrd;

    my $prmcrd = Chemistry::ESPT::Aprmcrd->new();

DESCRIPTION

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This module provides methods to quickly access data contained in an AMBER prmcrd file. AMBER prmcrd files can only be read currently.

ATTRIBUTES

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All attributes are currently read-only and get populated by reading the assigned ESS file. Attribute values are accessible through the $Aprmcrd->get() method.

CARTCOORD

NATOMS x 3 matrix containing Cartesian coordinates

METHODS

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Method parameters denoted in [] are optional.

$prmcrd->new()

Creates a new Aprmcrd object

$prmcrd->analyze(filename [spin])

Analyze the spin results in file called filename. Spin defaults to Alpha.

VERSION

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0.02

SEE ALSO

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Chemistry::ESPT::ESSfile, http://amber.scripps.edu

AUTHOR

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Dr. Jason L. Sonnenberg, <sonnenberg.11@osu.edu>

COPYRIGHT AND LICENSE

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Chemistry-ESPT documentation  | view source Contained in the Chemistry-ESPT distribution.