Chemistry/MacroMol version 0.06

For the purposes of this module, a macromolecule is just a molecule that consists of several "domains". For example, a protein consists of aminoacid residues, or a nucleic acid consists of bases. Therefore Chemistry::MacroMol is derived from Chemistry::Mol, with additional methods to handle the domains.

The way things are currently structured, an atom in a macromolecule "belong" both to the MacroMol object and to a Domain object. This way you can get all the atoms in $protein via $protein->atoms, or to the atoms in residue 123 via $protein->domain(123)->atoms.

CHANGES SINCE VERSION 0.06

INSTALLATION

To install this module type the following:

perl Makefile.PL
make
make test
make install

DEPENDENCIES

This module requires these other modules and libraries:

        Chemistry::Mol      0.24 
        Scalar::Util        0

COPYRIGHT AND LICENSE

Copyright (C) 2004 Ivan Tubert

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.