GOBO::Definable - GOBO::Definable documentation

GOBO documentation Contained in the GOBO distribution.

Index

Code Index:

NAME

Top

GOBO::Definable

SYNOPSIS

Top

DESCRIPTION

Top

A role for any kind of entity that can have a definition attached

Typically one would define an GOBO::RelationNode or an GOBO::ClassNode, but not an GOBO::InstanceNode (instances do not have definitions, but they may have descriptions)

There are both textual definitions and logical definitions. A logical definition is an equivalence relationship to an GOBO::ClassExpression. Simple terminology-style ontologies do not have logical definitions.

TBD

Is this over-abstraction to use a Role? This could be simply mixed in with Node

GOBO documentation Contained in the GOBO distribution. 
package GOBO::Definable;
use Moose::Role;

has definition => (is=>'rw', isa=>'Str');
has definition_xrefs => (is=>'rw', isa=>'ArrayRef[GOBO::Node]');
has equivalent_to_list => (is=>'rw', isa=>'ArrayRef[GOBO::Class]');
has logical_definition => (is=>'rw', isa=>'GOBO::ClassExpression');
has logical_definition_xrefs => (is=>'rw', isa=>'ArrayRef[GOBO::Node]'); # not yet in obo-format
has union_definition => (is=>'rw', isa=>'GOBO::ClassExpression::Union');
has complement_of => (is=>'rw', isa=>'GOBO::Node');

sub add_equivalent_to {
    my $self = shift;
    $self->equivalent_to_list([]) unless $self->equivalent_to_list([]);
    push(@{$self->equivalent_to_list},@_);
}


1;