| Sort-External documentation | view source | Contained in the Sort-External distribution. |
Sort::External - Sort huge lists.
my $sortex = Sort::External->new( mem_threshold => 1024**2 * 16 );
while (<HUGEFILE>) {
$sortex->feed($_);
}
$sortex->finish;
while ( defined( $_ = $sortex->fetch ) ) {
do_stuff_with($_);
}
Problem: You have a list which is too big to sort in-memory.
Solution: "feed, finish, and fetch" with Sort::External, the closest thing to a drop-in replacement for Perl's sort() function when dealing with unmanageably large lists.
Cache sortable items in memory. Periodically sort the cache and flush it to disk, creating a sorted "run". Complete the sort by sorting the input cache and any existing runs into an output stream.
Note that if Sort::External hasn't yet flushed the cache to disk when finish() is called, the whole operation completes in-memory.
In the CompSci world, "internal sorting" refers to sorting data in RAM, while "external sorting" refers to sorting data which is stored on disk, tape, punchcards, or any storage medium except RAM -- hence, this module's name.
Items fed to Sort::External will be returned in stringified form (assuming
that the cache gets flushed at least once): $foo = "$foo". Since this is
unlikely to be desirable when objects or deep data structures are involved,
Sort::External throws an error if you feed it anything other than simple
scalars.
Expert note: Sort::External does a little extra bookkeeping to sustain each item's taint and UTF-8 flags through the journey to disk and back.
my $sortscheme = sub { $Sort::External::b <=> $Sort::External::a };
my $sortex = Sort::External->new(
mem_threshold => 1024**2 * 16, # default: 1024**2 * 8 (8 MiB)
cache_size => 100_000, # default: undef (disabled)
sortsub => $sortscheme, # default sort: standard lexical
working_dir => $temp_directory, # default: see below
);
Construct a Sort::External object.
mem_threshold - Allow the input cache to consume approximately
mem_threshold bytes before sorting it and flushing to disk. Experience
suggests that the optimum setting is somewhere in the range of 1-16 MiB.
cache_size - Specify a hard limit for the input cache in terms of
sortable items. If set, overrides mem_threshold.
sortsub -- A sorting subroutine. Be advised that you MUST use $Sort::External::a and $Sort::External::b instead of $a and $b in your sub. Before deploying a sortsub, consider using a GRT instead, as described in the Sort::External::Cookbook (Sort::External::Cookbook) -- it's probably a lot faster.
working_dir - The directory where the temporary sortfile will reside. By default, the location of the sortfile is determined by the behavior of File::Temp's constructor.
$sortex->feed(@items);
Feed one or more sortable items to your Sort::External object. It is normal for occasional pauses to occur during feeding as caches are flushed.
# if you intend to call fetch...
$sortex->finish;
# otherwise....
use Fcntl;
$sortex->finish(
outfile => 'sorted.txt',
flags => ( O_CREAT | O_WRONLY ),
);
Prepare to output items in sorted order.
If you specify the parameter outfile, Sort::External will attempt to write
your sorted list to that location. By default, Sort::External will refuse to
overwrite an existing file; if you want to override that behavior, you can
pass Fcntl flags to finish() using the optional flags parameter.
Note that you can either finish() to an outfile, or finish() then fetch()... but not both.
while ( defined( $_ = $sortex->fetch ) ) {
do_stuff_with($_);
}
Fetch the next sorted item.
Please report any bugs or feature requests to
bug-sort-external@rt.cpan.org, or through the web interface at
http://rt.cpan.org/NoAuth/ReportBug.html?Queue=Sort-External.
The Sort::External::Cookbook (Sort::External::Cookbook).
File::Sort, File::MergeSort, and Sort::Merge as possible alternatives.
Marvin Humphrey <marvin at rectangular dot com> http://www.rectangular.com
Copyright 2005-2008 Marvin Humphrey. All rights reserved. This module is free software. It may be used, redistributed and/or modified under the same terms as Perl itself.
| Sort-External documentation | view source | Contained in the Sort-External distribution. |