GO::DebugUtils - GO::DebugUtils documentation

go-db-perl documentation Contained in the go-db-perl distribution.

Index

Code Index:

NAME

Top

GO::DebugUtils

DESCRIPTION

Top

Miscellaneous debugging utilities

FUNCTIONS

Top

setsqllog

 usage:

  use GO::DebugUtils qw(:sql);
  open(MYLOGFILE, ">x.log");
  $ENV{SQL_TRACE} = 1;
  setdblog(\*MYLOGFILE);
  # ... main code here
  close(MYLOGFILE);

  defaults to STDERR

setdblog

 usage:

  use GO::DebugUtils qw(:db);
  open(MYLOGFILE, ">x.log");
  $ENV{DBLOGGING} = 1;
  setdblog(\*MYLOGFILE);
  # ... main code here
  close(MYLOGFILE);

  defaults to STDERR

setlog

 usage:

  use GO::DebugUtils qw(:general);
  open(MYLOGFILE, ">x.log");
  $ENV{MSGLOGGING} = 1;
  setdblog(\*MYLOGFILE);
  # ... main code here
  close(MYLOGFILE);

  defaults to STDERR

msglog

outputs a log message. if the environment variable MSGLOGGING is not set, this function will do nothing.

use the function setlog to set a logging file; otherwise output will default to STDERR

this is for general logging messages

usage:

  msglog("logging message");

dblog

outputs a db log message. if the environment variable DBLOGGING is not set, this function will do nothing.

use the function setdblog to set a logging file; otherwise output will default to STDERR

for consistency, this should be used to a produce a high level description of operations performed to modify the database

usage:

  dblog("add the clone and associated data");

sqllog

outputs an sql log message. if the environment variable SQL_TRACE is not set, this function will do nothing.

use the function setsqllog to set a logging file; otherwise output will default to STDERR

this should be used to produce an output of SQL commands executed

usage:

  sqllog("$sql_command");
go-db-perl documentation Contained in the go-db-perl distribution. 
# $Id: DebugUtils.pm,v 1.3 2007/09/28 02:57:18 cmungall Exp $
#
# This GO module is maintained by Chris Mungall <cjm@fruitfly.org>
#
# see also - http://www.geneontology.org
#          - http://www.godatabase.org/dev
#
# You may distribute this module under the same terms as perl itself

#!perl -w 
#
# DebugUtils.pm
# Copyright Berkeley Drosophila Genome Project 1999
#
# Miscellaneous debugging utilities
#

package GO::DebugUtils;


use Exporter;

@EXPORT_OK = qw(printErrorLine printDebugLine 
		sqllog dblog msglog setsqllog setdblog setlog);
%EXPORT_TAGS  = 
  (all=> [qw(printErrorLine printDebugLine 
		sqllog dblog msglog setsqllog setdblog setlog)],
   sql=> [qw(sqllog setsqllog)],
   db=>  [qw(dblog setdblog)],
   general=> [qw(msglog setlog)]);

@GO::DebugUtils::ISA = qw (Exporter);

# Behavior Constants - public

$::DEBUG = 0;
$::VERBOSE = 0;
$::STDERR_TO_STDOUT = 0;


use strict;

# - - - - - - - - - - - PROGRAM FLOW - - - - - - - - - - - - 


*GO::DebugUtils::LOGF = *STDERR;
*GO::DebugUtils::DBLOGF = *STDERR;
*GO::DebugUtils::SQLLOGF = *STDERR;


sub setsqllog {
    *SQLLOGF = shift;
}


sub setdblog {
    *DBLOGF = shift;
}


sub setlog {
    *LOGF = shift;
}


sub msglog {
    if ($ENV{MSGLOGGING}) {
	my $string = shift;
	print LOGF "$string.\n";
    }
}


sub dblog {
    if ($ENV{DBLOGGING}) {
	my $string = shift;
	print DBLOGF "DBLOG:$string.\n";
    }
}


sub sqllog {
    my $string = shift;
    if ($ENV{SQL_TRACE}) {
        if ($ENV{SQL_TRACE_WITH_TIME}) {
            my $t = time;
            print SQLLOGF "SQL:$t:$string\n";
        }
        else {
            print SQLLOGF "SQL:$string\n";
        }
    }
#    print "<pre>SQL is $string</pre>";
}

sub printDebugLine
  {
    my ($string, $verbose_only) = @_;
    
    if ($::DEBUG || $ENV{DEBUG})
      {
	if ($verbose_only && (!$::VERBOSE && !$ENV{VERBOSE}))
	  {
	  }
	else
	  {
	    if ($::STDERR_TO_STDOUT)
	      {
		print "${string}\n";
	      }
	    else
	      {
		print STDERR "${string}\n";
	      }
	  }
      }
  }


sub printErrorLine
  {
    my ($string, $verbose_only) = @_;
    
    if ($::STDERR_TO_STDOUT)
      {
	print "${string}\n";
      }
    else
      {
	print STDERR "${string}\n";
      }
  }



1;